Building a manuscript with sciquill
Examples of input/output
I use markmeld to produce all our lab's preprints. I've made some jinja templates available here:
https://github.com/databio/mm_templates/tree/master/manuscript
There are few example repositories showing how this works:
The markmeld repository contains a demo.
There's also a standalone demo here that also shows you how to use a github action to build the manuscript:
https://github.com/databio/sciquill_paper_example
I still need to work on a full demo for how to build it on your own, which I plan to put in the examples folder in this repository.